PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv6_135660_ocpz.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bZIP
Protein Properties Length: 363aa    MW: 41231.8 Da    PI: 6.5245
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv6_135660_ocpz.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.73.9e-1179107533
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                         k++rr+++NReAAr+sR+RKka+i++Le 
  Bv6_135660_ocpz.t1  79 KVQRRLAQNREAARKSRLRKKAYIQQLEL 107
                         89*************************94 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.7E-871123No hitNo description
SMARTSM003382.1E-675149IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.92177121IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.04E-679121No hitNo description
PfamPF001703.7E-879111IPR004827Basic-leucine zipper domain
PROSITE patternPS0003608297IPR004827Basic-leucine zipper domain
PfamPF141442.7E-28165238IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009409Biological Processresponse to cold
GO:0042742Biological Processdefense response to bacterium
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    Send to blast
MNSSSTQFVM SRRMNIYEPL HQISSWVDSF GDEGYPNVSP STVVEMNERL DNLSEDTSSH  60
GAQAPSNKYD QEASKPVEKV QRRLAQNREA ARKSRLRKKA YIQQLELGRS KLMQMEQELE  120
RVRQQGMYVG GGIDPLPFSA SSVNSGIVAF EMEYGHWVEE QNKLICELRN ALNTHITDIE  180
LRILVDSGMK HYFDLFQLKA GAAKADVFYL ITGMWQTSTE RFFLWIGGFR PSELLKVLGP  240
QLDPLTDQQV MDVYNLKQSC EQAEVALSQG IEKLQQTLAD TIATDHLGDG LYTSEMANNA  300
IEKLEALVSF ANQADHLRRE TLRQMHRILT VRQAARGLLA LGEYFQRLRA LSSLWSSRPR  360
PPA
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00502DAPTransfer from AT5G10030Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010680601.10.0PREDICTED: transcription factor TGA4 isoform X1
SwissprotQ391621e-173TGA4_ARATH; Transcription factor TGA4
TrEMBLA0A0J8C5K50.0A0A0J8C5K5_BETVU; Uncharacterized protein
STRINGVIT_07s0031g01320.t010.0(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10030.21e-166TGACG motif-binding factor 4